Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq363 118 1e-21 >seq363 Length=233870 Score = 118 bits (130), Expect = 1e-21 Identities = 242/355 (68%), Gaps = 14/355 (4%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||||| ||||| |||||||||| | ||||||||| |||||||| Sbjct 170668 CTTGAGTCCTGTGACATGGGCCACCATATAGGTCAGCAAAGCGTAGCTGGCAATGTTGAA 170609 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||| || || || |||||||| | || ||||| |||| || || || || || | | Sbjct 170608 GGGTACACCGAGTCCCATGTCAGCAGAACGCTGATACAATTGACACGAAAGTTCATCCTC 170549 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 || || |||||||| ||| ||| || || ||||| ||||| | || |||| | Sbjct 170548 GGCAACATAGAACTGCACCAGACAGTGACAKGGGGGCAGAGCCATCTGGTTCAAGTCCCC 170489 Query 145926 CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCC---TCTTGATCTCCCC 145982 |||||||| | | | | || || || | || | ||| || ||||||| Sbjct 170488 GGGGTTCCAAGAGCATAATATGATCCGCC-GGTCACTGGG--CCGAGTCTTGATGGTGTT 170432 Query 145983 TATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA----GTCCA 146038 ||| | ||| || || || | || ||||| | ||| ||||| | |||| Sbjct 170431 TATTATCTCCGCAAGTTGATCTATCCCTTGCCC---GGAAT-AATCTTGAAACATGTCCT 170376 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| |||||| |||| | ||||||||||||||| || || || ||||| || Sbjct 170375 GGTACTTGGCCCCATAGTGACGCCACTGGAACCCGTACACCGGTCCTAGGTCACC 170321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589982859773440