Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq792 84.2 5e-11 >seq792 Length=144408 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || || |||||| | ||||||||||||||||| ||| | |||||| || |||||| Sbjct 32005 TGCCCTCCCTTCAAGATAGTGATCCTGGACGAGGCCGACTCAATGACGCACGCAGCGCAG 31946 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGC-ACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 |||| || || |||| |||||| ||| | | | || | || || || | || Sbjct 31945 GCCGCGCTACGTAGAACCATGGAG-CGCGAGTGCAAGTCCACCAGGTTCTGTCTCATTTG 31887 Query 254321 CAACTACGT--GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTC 254378 ||||||||| ||||| |||||| ||||| |||| || ||| ||||||| | ||| Sbjct 31886 CAACTACGTGAGTCGA--ATCATCCAGCCGCTCACTTCCCGTTGCACCAAGTTCAGGTTC 31829 Query 254379 A 254379 | Sbjct 31828 A 31828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073591182798848