Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq7 134 1e-26 >seq7 Length=109384913 Score = 134 bits (148), Expect = 1e-26 Identities = 169/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 14477 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14536 ||||||||||| || | ||||||||||| || || ||||| || || ||||| |||||| Sbjct 105116702 TATGTATCAATGAGGAGACTATACATTTCTGAATGAATGTTCTCGATGGCTATTTGAAAA 105116761 Query 14537 CCATAAAAACATCTAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATT 14595 |||||||| || || ||||| | | ||| || || ||| | |||||||| | | || Sbjct 105116762 CCATAAAAGCACCTCGCTTCGGTCACTTGCACTTCTTGACT-GAATCTTTCCACAAGGTT 105116820 Query 14596 TTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTG 14655 ||||||||| || |||||| || ||||| ||||| | | | ||| || || ||| Sbjct 105116821 TTCATTAACAATGCCATCAGATGCRGCAAAGAATGCTAGGACATGTTTGATGAAATATCT 105116880 Query 14656 CTCTTCATTGC-TGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGA 14701 ||| || | || | |||| |||||||| || |||||||| ||||| Sbjct 105116881 CTCATC-TGGCTTCAGTTGTTTCCAATGGGACAAATCCTTTAAAAGA 105116926 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13915 ||||| || |||||| | ||||||||| || || ||||| || || || || || Sbjct 105111369 TAAAACTCGGCATCTAGTGTAAAAACATTGTCTTCCTTGTTCGACATTACACCACACTTC 105111428 Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975 || ||||| | ||| | |||||||| |||||||| || || || ||||| || | |||| Sbjct 105111429 TGGTATTCGCCCACTTTCTTTTCAAAAAAGTTAGTCTTCCCCTCAAGTGAAATGTGTTCC 105111488 Query 13976 ATAAAATCAAATGGATTT 13993 || || |||||||||||| Sbjct 105111489 ATGAAGTCAAATGGATTT 105111506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482268810580480