Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=39772498 Score = 93.3 bits (102), Expect = 3e-14 Identities = 106/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 || |||| || || || || | ||| |||| ||||| ||||||||||| || ||||||| Sbjct 4313304 TTAGTTA-CCACCACGAAGGCGAAGAACCAGATGAAGAGTTGATTCTTTCTGGATGTTGT 4313246 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 |||| | | |||| | | ||| || | ||||||||| ||| | || ||||| ||||||| Sbjct 4313245 AGTCTGAAAGTGTTCTTCCATCCTCAAGTTGTTTGCCGGCAAARATTAGTCTCTGTTGAT 4313186 Query 18211 CCACGGGCACGCCTTCCTTATC 18232 | || | |||||||| || Sbjct 4313185 CTGGAGGTATTCCTTCCTTGTC 4313164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379285118224320