Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq363 113 4e-20 >seq363 Length=233870 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || ||||| || || | || ||| ||||| | ||||||||||| ||||| || || Sbjct 170664 AGTCCTGTGACATGGGCCACCATATAGGTCAGCAAAGCGTAGCTGGCAATGTTGAAGGGT 170605 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || ||||| |||||||| || || | ||| |||| || || || || || || || Sbjct 170604 ACACCGAGTCCCATGTCAGCAGAACGCTGATACAATTGACACGAAAGTTCATCCTCGGCA 170545 Query 21111 ACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 || || ||||| ||| | || |||||| || || ||||||||| | | |||| |||| Sbjct 170544 ACATAGAACTG-CACCAGACAGTGACAKGGGGGCAGAGCCATCTGGTTCAAGTCCCCGGG 170486 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCG 21208 |||||| | ||| | | ||| ||||| || |||||| Sbjct 170485 GTTCCAAGAGCATAATATGATCCGCCGGTCACTGGGCCG 170447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427709600609280