Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=10813142 Score = 93.3 bits (102), Expect = 4e-14 Identities = 230/344 (67%), Gaps = 9/344 (3%) Strand=Plus/Minus Query 153450 AATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGGACGATGGCGCATATTAGAtttt 153509 || |||||||||| |||||| || || ||||| ||||| || || | ||| || || | Sbjct 9995936 AAGGCATCGGCCAGACCTTGGATTCCGATGCCAATGGGTCGGTGCCTCATGTTGGAGAGT 9995877 Query 153510 tttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAATTTTATTTAAACTAATCACGACA 153569 || || | |||| |||||| ||||| || || || || || | | | || || Sbjct 9995876 TTGGCTTCAGCAACTGGATAGTAATTGGCATCTATGATCTTGTTCAGATTCCTCGTCACT 9995817 Query 153570 TGTTTCACCACAGAATGCAACAGTTGA--AAATC--AAACGTT--CCATTAATGATATAT 153623 |||| || | | | |||| ||||| || ||| ||| | | | | | Sbjct 9995816 AGTTTGGATACGTTCTTTAGC--TTGACAAAATCGTAAGAGTTGTCCAA-ATTAACAAAC 9995760 Query 153624 TTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGT 153683 |||||||||||||||| |||||||| || || ||| | || || || | || ||||| Sbjct 9995759 ATGTTGACGGCAATCGAGGCCAAGTTACACACAGCAATCTCATCAGGTGAGCTATATTCC 9995700 Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTG 153743 || || || | || | |||||| || || ||| || ||| || ||| || Sbjct 9995699 ACAATCTCTGTGCATAGATTGCTACACTTGATCGTTCCAAGATTCTGCTGGTTGGACTTC 9995640 Query 153744 CGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787 | |||||| || ||||| || |||||||| ||||| || ||||| Sbjct 9995639 CTGTTACATGCATCCTTATAAAGCATGTAGGGTGTCCCTGTTTC 9995596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495985026611200