Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2318 86.0 7e-12 >seq2318 Length=55119 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| |||||| | ||||||||| | | |||||| ||||| || ||||| Sbjct 23875 TAGGCTGCAAACATGTGAAAGGAATTCTCCTGTTTGGACCACCTGGAACTGGGAAAACGC 23934 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATG 164617 ||||||||||| |||| ||| | | ||| || || || || ||||| |||| Sbjct 23935 TAATGGCTCGACAAATTGGA-AAGATGCTGAATGCTCGTGAACCC--AAGATTGTAAATG 23991 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 | || | | ||| |||| ||||| || ||||||||||| ||| | || | | | ||| Sbjct 23992 GGCCGCAGATCTTGGACAAGTATGTTGGCGAGTCAGAAGCCAATATCAGGAGGCTCTTTG 24051 Query 164678 AGGAGGCTGAAGAAGAACAAAA 164699 ||| ||||| || ||| |||| Sbjct 24052 CGGATGCTGAGGAGGAAGAAAA 24073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595777137177600