Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq2 122 5e-23 >seq2 Length=39772498 Score = 122 bits (134), Expect = 5e-23 Identities = 187/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 3869 GGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAAT 3928 ||| | ||||||||||||||||||||||| ||||| ||||| || || ||| | ||||| Sbjct 21526423 GGACAGGGTGTACATTTTATGATGGCTGATGGTGGTTTCTCAGTGGAAGGTAAGGAAAAC 21526364 Query 3929 ATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATC 3988 || || || || || || ||| || | || ||||| |||| | | | ||| | || Sbjct 21526363 ATTCAGGAGATTTTGTCAAAAGAGCTATACTTGTGCCAATTTATTGTGGCACTTTGCATT 21526304 Query 3989 ATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCT 4048 | ||| | ||||||| ||| ||| || || ||| | || ||||| ||||||| Sbjct 21526303 GTTAGAAATAAAGGTCATTTTGTGTGCAAGTTGTTTGATGTGTTCACACCATTTAGTGTA 21526244 Query 4049 GGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCA 4108 || | | ||||||||||||| | |||||| || |||| ||||||| | | Sbjct 21526243 GGACTTATATATTTGATGTATAAAGCTTTTAGGAAAATAAGTATACACAAACCAAACACT 21526184 Query 4109 TCGCGACCGGCCAATTCTGAAAGATAT 4135 ||||| ||||| |||||| | ||| Sbjct 21526183 AGCCGACCTGCCAACTCTGAACGCTAT 21526157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276510673350208