Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq1999 93.3 4e-15 seq270 86.0 6e-13 >seq1999 Length=64227 Score = 93.3 bits (102), Expect = 4e-15 Identities = 196/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 550 AGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTGCT 609 || |||| ||| || || |||||||| || | ||| || || ||||| |||||||| Sbjct 23929 AGGACTTCTGTCGCGAACGTGCTTGTCGCTTCCCACGCTGCCTCTGACGACAGCATCATA 23870 Query 610 GCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGATGT 669 | ||| | || || || || | || | | |||||| | || || || Sbjct 23869 TCCCCTAAGTTTTCCGGCGTAATCTTTCCCTYTACTCTGACCTCCAGGTTTTCACGCTGG 23810 Query 670 GGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAG 729 | | | | || | ||| ||||| ||||||||||||| || | ||||| | ||| Sbjct 23809 GTATCATATCGAGGACACGTGAAGAACACGTGCTCTGCATTCTCCTCTACTCCGCGACAG 23750 Query 730 GATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCG 789 | |||||||| ||||||| |||| | | | || || || ||||||| || ||| Sbjct 23749 GTGGGGCACTCCGGGGAATCCTCATACCTAAACTTGTTTAGGTATACCCGGAAGCACCCG 23690 Query 790 TGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTT 842 |||||||| | ||||||||| | || || ||||| | |||| || ||||| Sbjct 23689 TGTCCTGAAATCATCTGTGTCAAGTAGTAATTGACAGCCTCGTGGCTGCGGTT 23637 >seq270 Length=285447 Score = 86.0 bits (94), Expect = 6e-13 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 691 AAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTA 750 ||||| ||||||| |||| | | ||||| | |||| |||||||| ||||||| Sbjct 214512 AAGAACACGTGCTTGGCATTCACCTCTACTCCGCGACAGGTGGGGCACTCCGGGGAATCC 214453 Query 751 TCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTA 810 |||| ||| | || || ||||||||||| || | |||||| || | ||||||||| Sbjct 214452 TCATACTTAAACTTGTATAGGTACGCCCGGAAGCAACTGTGTCCCGAGATCATCTGTGTC 214393 Query 811 AGATAATAGTTGACCTCACCGTGACTCCGGTT 842 | ||| || ||||| | | ||| || ||||| Sbjct 214392 AAATAGTAATTGACAGCTCTGTGGCTGCGGTT 214361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50942897044096