Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq3789 107 2e-18 >seq3789 Length=27072 Score = 107 bits (118), Expect = 2e-18 Identities = 206/299 (69%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||||||| |||||||| | | |||| | | || || ||| || ||| Sbjct 7005 CCATGAGTTAAATGTCCACCGCAGTTGAGTGACAATCCAAGTATTGTATCACCCGGAGCA 6946 Query 6986 AGCAACGCATGGTAAACA--GCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 |||| | | | ||||| ||||| |||||||| ||||| || || ||||||||||||| Sbjct 6945 AGCAGTGAA--GCAAACACTGCTTGATTTGCCTGAGAACCAGAGTGAGGTTGAACGTTTG 6888 Query 7044 CGAAATTGCAACTAAACAG-TTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCG 7102 | || || || |||||| || ||| | || || ||||| || || | ||||| Sbjct 6887 CAAATTTAACACCAAACAGCTTACAAAGC-CTTTCTATAGCCAGATTTTCAACTTCATCT 6829 Query 7103 GCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTA 7162 | | |||| || | |||||| | ||| || ||||| || || ||||| || || || Sbjct 6828 ACATACTCACAGCCACAGTAATATCTTTTACCAGGATAACCTTCTGCATATTTATTAGTC 6769 Query 7163 AAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAA 7221 | || |||||| || ||| ||| || | | || | || || ||||||||||| Sbjct 6768 AGAAAAGAACCCTGTACTTCCATCACTGCTTTACTTGCAAAATTCTCCGATGCAATCAA 6710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553265506106880