Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 105 6e-18 seq7 86.0 6e-12 >seq2 Length=39772498 Score = 105 bits (116), Expect = 6e-18 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || || || | || || || | || || | ||| ||||| | Sbjct 4313070 AATGCAAATCTTCGTCAAGACTCTCACCGGTAAGACCATTACACTGGAAGTAGAAGCGTC 4313129 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || |||||| | || ||| || || ||||| ||||| |||||||| ||||| Sbjct 4313130 TGATACAATCGAGAATGTAAAAGCTAAAATCCAGGACAAGGAAGGAATACCTCCAGATCA 4313189 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 ||| ||||| || | | |||||||||||| || |||| |||| || ||| ||||| Sbjct 4313190 ACAGAGACTAATYTTTGCCGGCAAACAACTTGAGGATGGAAGAACACTTTCA--GACTAC 4313247 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| || |||||||| ||| | |||||||| || | ||| | || || || Sbjct 4313248 AACATCCAGAAAGAATCAACTCTTCATCTGGTTCTTCGCCTTCGTGGTGGTAA 4313300 >seq7 Length=109384913 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/204 (70%), Gaps = 16/204 (8%) Strand=Plus/Plus Query 119964 TCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGGTA---GAGCTCCTTTTTTC 120020 || |||| ||| |||||||| |||||| | || | ||| || | || ||| |||||| Sbjct 105115007 TCATCTCGGGAGATGAGTTCATTGCTGAATGTGAGGCCTGGCATAAGACCTCGCTTTTTC 105115066 Query 120021 GAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGaaaaaaaGACGCCTTCGACGATA 120080 | | | ||||||||||| |||||||||||||||| ||| || || Sbjct 105115067 AACC---------AAAAAATTGCAGCAAAGCTACCAGAAAAAAAGATGCCCTCAACAGCT 105115117 Query 120081 GCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATT--GATTTTCGATCCATTTTTGAG 120138 ||||| || | || ||||| |||||||||||| | || | |||||||| | | Sbjct 105115118 GCAAATGCAATTATCCGTTCTCCGAATGTGGCAGTCTCGGAGCT--GATCCATTCTAAGG 105115175 Query 120139 CCCAAGCCGCCTTCTGCTTGACAC 120162 ||||| | ||||||| ||| |||| Sbjct 105115176 CCCAATCTGCCTTCTTCTTCACAC 105115199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586196945920