Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=39772498 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| ||||||||||| ||| | || || ||||| || || || |||||| ||| Sbjct 4310967 CTTTCTGAATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCGAAGA 4310908 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 |||| ||||| ||||| || || || || || ||||| |||||| || | | | Sbjct 4310907 TGAGTCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCYTGAATCTTGGCCTTCACATTCT 4310848 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | ||||||| | || || || | ||| | || ||||| ||||| || || || | Sbjct 4310847 CGATAGTGTCGGCCGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGA 4310788 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 4310787 AGATCTGCAT 4310778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420069186738432