Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq363 96.9 3e-15 >seq363 Length=233870 Score = 96.9 bits (106), Expect = 3e-15 Identities = 229/345 (66%), Gaps = 20/345 (6%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| || | |||||| || | | | |||||||||||||| || || Sbjct 170664 AGTCCTGTGACATGGGCCACCATATAGGTCAGCAAAGCGTAGCTGGCAATGTTGAAGGGT 170605 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || || | |||||||| | || | |||||||| ||||| ||||| ||| | || || Sbjct 170604 ACACCGAGTCCCATGTCAGCAGAACGCTGATACAATTGACACGAAAGTTCATCCTCGGCA 170545 Query 20357 ACATAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGG 20415 ||||| || || || || ||||||| || || || |||||| ||||||| | || Sbjct 170544 ACATAGAACTGCACCAGAC-AGTGACAKGGGGGCAGAGCCATCTGGTTCAAGTCCCCGGG 170486 Query 20416 GTTCCACGCACACATAATGATTCTTCTATC---GTGCGGATTAT------TTTTTATTAA 20466 |||||| | || | ||||| | | || | || || | | | ||||||| Sbjct 170485 GTTCCAAGAGCATAATATGATCCGCCGGTCACTGGGCCGAGTCTTGATGGTGTTTATTAT 170426 Query 20467 ATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCAC 20526 ||| || | ||| || | ||| || || | ||| || | | |||| Sbjct 170425 CTCCGCA---------AGTTGATCTATCCCTTGCCCGGAATAATCTTGAAACATGTCCTG 170375 Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCC 20571 |||| |||||| |||| | ||||||||| ||||| || ||||| Sbjct 170374 GTACTTGGCCCCATAGTGACGCCACTGGAACCCGTACACCGGTCC 170330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441302533450240