Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 154 1e-32 >seq4 Length=10813142 Score = 154 bits (170), Expect = 1e-32 Identities = 488/751 (65%), Gaps = 17/751 (2%) Strand=Plus/Plus Query 123587 TATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAA 123646 ||| || || | || || ||||| || || || |||||||| || || || || || || Sbjct 9995577 TATCATYGAGTCCCAGGTAGAAACAGGGACACCCTACATGCTTTATAAGGATGCATGTAA 9995636 Query 123647 CAGGAAAACCAATCAG-AGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAA 123705 |||||| |||| ||| || | ||||| ||| || || ||||| ||||| ||| | || | Sbjct 9995637 CAGGAAGTCCAACCAGCAGAATCTTGG-AACGATCAAGTGTAGCAATCTATGCACAGAGA 9995695 Query 123706 TTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGA 123765 || | ||||| ||| | ||| | | || |||||||| ||||| |||||| ||| | Sbjct 9995696 TTGTGGAATATAGCTCACCTGATGAGATTGCTGTGTGTAACTTGGCCTCGATTGCCGTCA 9995755 Query 123766 A-----TCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAA 123820 | | ||| | | | | | ||| |||| | ||| || | || | || Sbjct 9995756 ACATGTTTGTTAATTTGGACAA--CTCTTACGATTTTGTCAAGCTAAAGAACGTATCCAA 9995813 Query 123821 AACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGC 123880 | || | |||| ||||||| || || |||| |||| ||||| | | ||||| Sbjct 9995814 ACTAGTGACGAGGAATCTGAACAAGATCATAGATGCCAATTACTATCCAGTTGCTGAAGC 9995873 Query 123881 GCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGC 123940 | || || ||| ||| |||| | || | || || ||||| ||||||| || Sbjct 9995874 CAAACTCTCCAACATGAGGCACCGACCCATTGGCATCGGAATCCAAGGTCTGGCCGATGC 9995933 Query 123941 GTTTGTAATGCTGCGCATGCCGTACGAAAGCGACG----AAGCAAAGTTGCTTAATACGC 123996 || | | |||| | || | ||| || || | | ||||| ||| ||| | | Sbjct 9995934 CTTCATCCTAATGCGGCTTCCTTTCGACAGTGAGGGTTCACGCAAA-TTG---AATGCTC 9995989 Query 123997 AAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTC 124056 |||| ||||| ||||| ||||| || |||||||| || || || ||||| | | | Sbjct 9995990 AAATTTTTGAAACCATTTACTACGGGGCATTGGAGGCTAGTTGTGAGCTTGCAGAGAAAC 9996049 Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116 || | ||||| | || | || | || | || |||||| | |||||||||| Sbjct 9996050 TGGGGCCATACGAGACGTATGAAGGATGTCCAGTTAGTAAGGGTATTCTTCAGTACGACA 9996109 Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGA 124176 ||||| || || || || ||||||||| ||| | | |||||||| || | Sbjct 9996110 TGTGGGGTGTGACTCCTACTKCTTTGTGGGATTGGGCGGCTCTAAAACAAAAAATTGCTG 9996169 Query 124177 CGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAA 124236 | || ||| || | ||||| || | | || ||||| || || | ||||| || | Sbjct 9996170 CACATGGTGTGAGAAACTCTCTTCTTCTTGCACCTATGCCTACAGCTTCTACTGCACAGA 9996229 Query 124237 TTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGT 124296 | | |||||||| |||||||| ||||| | ||| | ||| | ||| ||| | || Sbjct 9996230 TACTCGGAAACAATGAATCCTTTGAGCCATACACCACGAATATCTACACTCGAAGGGTAC 9996289 Query 124297 TAGCCGGCGATTTTCAAGTGATAAATCATCA 124327 || | || || || ||||| | || ||||| Sbjct 9996290 TATCAGGAGAGTTCCAAGTCGTGAACCATCA 9996320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451931241090560