Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 136 2e-26 seq247 127 8e-24 seq2 113 2e-19 seq228 102 3e-16 >seq8 Length=79225393 Score = 136 bits (150), Expect = 2e-26 Identities = 283/420 (67%), Gaps = 14/420 (3%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || || ||| | ||| ||||| | || || |||||| || | ||||| ||||||||| Sbjct 66491322 GGTAAACCCAAGATTGAAGTAGAATAYAAGGGTGAAGTGAAGAGATTTGCCCCTGAAGAA 66491263 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||||| || || |||| ||| |||||||| || |||| | || Sbjct 66491262 ATCAGTTCCATGGTTCTGACAAAGATGAGAGAGACAGCAGAGGCTTACCTTGG--CGGCA 66491205 Query 451313 --GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370 |||| ||||| || || || ||||| ||||| || || || |||| | || || | Sbjct 66491204 GTGTTAGAGATGCTGTCATCACAGTTCCAGCTTACTTTAACGACTCACAGAGACAGGCCA 66491145 Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430 | || ||||| ||| || || ||| |||| || || || || || || || || || | Sbjct 66491144 CYAAGGATGCTGGAGCCATCGCGGGTATAAACGTCCTGCGCATCATAAACGAGCCCACGG 66491085 Query 451431 CAGCTGCTCTAGCATATGGACT--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTT 451488 | ||||| || || ||||| || | | |||| || || || || || |||| Sbjct 66491084 CTGCTGCCCTGGCTTATGGTCTTGATAAGAATCTTAA-----AGGTGAGAAGAACGTTTT 66491030 Query 451489 AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG--- 451545 | |||||| |||| || ||||| |||| || |||| | ||||| || || Sbjct 66491029 GATCTTTGATCTTGGGGGCGGAACGTTTGATGTATCCATACTCACTATTGATGAAGGTTC 66490970 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||| ||||| || |||| || || || ||||| |||||||| || |||| || Sbjct 66490969 ACTATTYGAAGTTAAATCAACGGCAGGGGACACCCATCTTGGAGGTGAGGACTTTGACAA 66490910 >seq247 Length=300203 Score = 127 bits (140), Expect = 8e-24 Identities = 308/464 (66%), Gaps = 2/464 (0%) Strand=Plus/Plus Query 451904 GTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTT 451963 ||||| || ||||| |||||||| ||||| || ||||| | || || ||| Sbjct 154974 GTGCTCGTTGGAGGATCTACACGTATTCCCAAGATTCAGAGCCTACTGCAAAACTACTTT 155033 Query 451964 GGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCA 452023 | || || || || | | | | || ||||| || || || || |||||||| ||| Sbjct 155034 TGTGGTAAGCAGCTCAATTTGTCCATCAACCCTGACGAGGCGGTGGCGTATGGTGCAGCA 155093 Query 452024 GTTCAAGCAGCTATTCTAACAGGTT-CAGATGATGAAAAATTAGGAGATATTCTGTTAGT 452082 || || ||||| || || | || || | | | | | || |||| |||| |||| Sbjct 155094 GTGCAGGCAGCAATCCTCAGTGGCGACACAAGCTCACAGATCCA-AGATGTTCTTCTAGT 155152 Query 452083 AGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAAT 452142 ||||||||||| || |||||||| |||||||||||||||| | ||||| || || | Sbjct 155153 TGATGTAACACCACTTTCTCTTGGCATTGAAACAGCTGGTGGGGTTATGACAAAGATAGT 155212 Query 452143 TAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAA 452202 |||| || |||||||| || ||| |||||| |||| ||| || || Sbjct 155213 CGAACGTAATGCTCGCATTCCTTGCAAGCAGACTCAAACTTTTACAACATACTCAGACAA 155272 Query 452203 CCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAA 452262 || || | ||| || ||||||| |||||||| ||||| || ||||| ||| ||||| Sbjct 155273 TCAGCCCGCTGTCACGGTTCAAGTTTTTGAAGGTGAACGCGCCATGACTAAAGACAATAA 155332 Query 452263 TAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAAT 452322 || ||| |||| | || ||| || ||| | || ||| || |||| Sbjct 155333 CCTTCTTGGAACCTTTAACTTGACAGGCATACCACCTGCTCAGAGAGGAGTCCCCAAAAT 155392 Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGA 452366 ||| | |||| |||| | || || || || ||| | || |||| Sbjct 155393 AGAAGTCACCTTTGATCTAGACGCCAACGGCATTTTGAACGTGA 155436 >seq2 Length=39772498 Score = 113 bits (124), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || || ||||| || ||||| || || || ||| | || Sbjct 4313070 AATGCAAATCTTCGTCAAGACTCTCACCGGTAAGACCATTACACTGGAAGTAGAAGCGTC 4313129 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | | ||| ||||| || || ||||||||||| ||||| ||||| Sbjct 4313130 TGATACAATCGAGAATGTAAAAGCTAAAATCCAGGACAAGGAAGGAATACCTCCAGATCA 4313189 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | |||| || | || ||||||||||| ||||||||||| | | || || || Sbjct 4313190 ACAGAGACTAATYTTTGCCGGCAAACAACTTGAGGATGGAAGAACACTTTCAGACTACAA 4313249 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | || || |||| ||||| Sbjct 4313250 CATCCAGAAAGAATCAACTCTTCA 4313273 >seq228 Length=312174 Score = 102 bits (112), Expect = 3e-16 Identities = 316/484 (65%), Gaps = 10/484 (2%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 || |||||||| ||||| || || ||||| || || || || || ||| || | || | Sbjct 173377 AACCCTGATGAGGCTGTCGCCTACGGTGCGGCTGTGCAGGCGGCCATTTTAGCTGG---A 173433 Query 452051 GATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 ||| | || || | |||| | ||||| | ||||| ||||| ||||||||||| Sbjct 173434 GATAAGTCYGAGGAAGTTCAAGATCTACTGTTGTTGGATGTCACACCRCTATCTCTTGGT 173493 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 |||| || ||||| || | |||||| | || || || || |||| ||| Sbjct 173494 ATTGAGACCGCTGGAGGGGTYATGACTGTCCTCATCAAGCGTAACACAACTATACCTACC 173553 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || ||| ||| || || | ||| || ||||| || ||||| || || || Sbjct 173554 AAGCAGACTCAGACCTTCACGACATACTCKGACAACCAGCCGGGTGTGCTGATCCAGGTT 173613 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | ||| ||||| || || ||||| ||| || || || || | ||| || | Sbjct 173614 TATGAGGGAGAGCGAGCCATGACTAAAGACAACAACCTTCTGGGCAAGTTTGAACTGACT 173673 Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347 |||||||||| ||||| || || ||||| || | || | ||| ||||||| Sbjct 173674 GGCATTCCTCCTGCACCAAGAGGTGTACCACAAATCGAGGTAACTTTCGATATTGATGCC 173733 Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTAC 452406 || ||||| | || |||| || | || || || | || ||| |||| || || || Sbjct 173734 AACGGTATCTTGAACGTGACCGCCATAGAGAAGTCCACAGG-AAAGGAGAACAAGATCAC 173792 Query 452407 AATTACTAATGATAAAAACCGT-TTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| || || || |||| ||| | || || ||||||||| ||||| | || | Sbjct 173793 CATTACAAACGACAAGGGCCGTCTTAGC-AAGGAGGATATTGAACGCATGGTCAACGATG 173851 Query 452466 CAGA 452469 |||| Sbjct 173852 CAGA 173855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975396002271488