Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13]
12,736 sequences; 1,042,628,579 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 2e-26
seq247 127 8e-24
seq2 113 2e-19
seq228 102 3e-16
>seq8
Length=79225393
Score = 136 bits (150), Expect = 2e-26
Identities = 283/420 (67%), Gaps = 14/420 (3%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| || ||| | ||| ||||| | || || |||||| || | ||||| |||||||||
Sbjct 66491322 GGTAAACCCAAGATTGAAGTAGAATAYAAGGGTGAAGTGAAGAGATTTGCCCCTGAAGAA 66491263
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || |||||||| || || |||| ||| |||||||| || |||| | ||
Sbjct 66491262 ATCAGTTCCATGGTTCTGACAAAGATGAGAGAGACAGCAGAGGCTTACCTTGG--CGGCA 66491205
Query 451313 --GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370
|||| ||||| || || || ||||| ||||| || || || |||| | || || |
Sbjct 66491204 GTGTTAGAGATGCTGTCATCACAGTTCCAGCTTACTTTAACGACTCACAGAGACAGGCCA 66491145
Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430
| || ||||| ||| || || ||| |||| || || || || || || || || || |
Sbjct 66491144 CYAAGGATGCTGGAGCCATCGCGGGTATAAACGTCCTGCGCATCATAAACGAGCCCACGG 66491085
Query 451431 CAGCTGCTCTAGCATATGGACT--AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTT 451488
| ||||| || || ||||| || | | |||| || || || || || ||||
Sbjct 66491084 CTGCTGCCCTGGCTTATGGTCTTGATAAGAATCTTAA-----AGGTGAGAAGAACGTTTT 66491030
Query 451489 AGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG--- 451545
| |||||| |||| || ||||| |||| || |||| | ||||| || ||
Sbjct 66491029 GATCTTTGATCTTGGGGGCGGAACGTTTGATGTATCCATACTCACTATTGATGAAGGTTC 66490970
Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|||| ||||| || |||| || || || ||||| |||||||| || |||| ||
Sbjct 66490969 ACTATTYGAAGTTAAATCAACGGCAGGGGACACCCATCTTGGAGGTGAGGACTTTGACAA 66490910
>seq247
Length=300203
Score = 127 bits (140), Expect = 8e-24
Identities = 308/464 (66%), Gaps = 2/464 (0%)
Strand=Plus/Plus
Query 451904 GTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTT 451963
||||| || ||||| |||||||| ||||| || ||||| | || || |||
Sbjct 154974 GTGCTCGTTGGAGGATCTACACGTATTCCCAAGATTCAGAGCCTACTGCAAAACTACTTT 155033
Query 451964 GGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCA 452023
| || || || || | | | | || ||||| || || || || |||||||| |||
Sbjct 155034 TGTGGTAAGCAGCTCAATTTGTCCATCAACCCTGACGAGGCGGTGGCGTATGGTGCAGCA 155093
Query 452024 GTTCAAGCAGCTATTCTAACAGGTT-CAGATGATGAAAAATTAGGAGATATTCTGTTAGT 452082
|| || ||||| || || | || || | | | | | || |||| |||| ||||
Sbjct 155094 GTGCAGGCAGCAATCCTCAGTGGCGACACAAGCTCACAGATCCA-AGATGTTCTTCTAGT 155152
Query 452083 AGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAAT 452142
||||||||||| || |||||||| |||||||||||||||| | ||||| || || |
Sbjct 155153 TGATGTAACACCACTTTCTCTTGGCATTGAAACAGCTGGTGGGGTTATGACAAAGATAGT 155212
Query 452143 TAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAA 452202
|||| || |||||||| || ||| |||||| |||| ||| || ||
Sbjct 155213 CGAACGTAATGCTCGCATTCCTTGCAAGCAGACTCAAACTTTTACAACATACTCAGACAA 155272
Query 452203 CCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAA 452262
|| || | ||| || ||||||| |||||||| ||||| || ||||| ||| |||||
Sbjct 155273 TCAGCCCGCTGTCACGGTTCAAGTTTTTGAAGGTGAACGCGCCATGACTAAAGACAATAA 155332
Query 452263 TAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAAT 452322
|| ||| |||| | || ||| || ||| | || ||| || ||||
Sbjct 155333 CCTTCTTGGAACCTTTAACTTGACAGGCATACCACCTGCTCAGAGAGGAGTCCCCAAAAT 155392
Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGA 452366
||| | |||| |||| | || || || || ||| | || ||||
Sbjct 155393 AGAAGTCACCTTTGATCTAGACGCCAACGGCATTTTGAACGTGA 155436
>seq2
Length=39772498
Score = 113 bits (124), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || ||||| || || || || ||||| || ||||| || || || ||| | ||
Sbjct 4313070 AATGCAAATCTTCGTCAAGACTCTCACCGGTAAGACCATTACACTGGAAGTAGAAGCGTC 4313129
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| || || | | ||| ||||| || || ||||||||||| ||||| |||||
Sbjct 4313130 TGATACAATCGAGAATGTAAAAGCTAAAATCCAGGACAAGGAAGGAATACCTCCAGATCA 4313189
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| | |||| || | || ||||||||||| ||||||||||| | | || || ||
Sbjct 4313190 ACAGAGACTAATYTTTGCCGGCAAACAACTTGAGGATGGAAGAACACTTTCAGACTACAA 4313249
Query 391229 TATTGATAAGGATGCAACACTTCA 391252
|| | || || |||| |||||
Sbjct 4313250 CATCCAGAAAGAATCAACTCTTCA 4313273
>seq228
Length=312174
Score = 102 bits (112), Expect = 3e-16
Identities = 316/484 (65%), Gaps = 10/484 (2%)
Strand=Plus/Plus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
|| |||||||| ||||| || || ||||| || || || || || ||| || | || |
Sbjct 173377 AACCCTGATGAGGCTGTCGCCTACGGTGCGGCTGTGCAGGCGGCCATTTTAGCTGG---A 173433
Query 452051 GATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107
||| | || || | |||| | ||||| | ||||| ||||| |||||||||||
Sbjct 173434 GATAAGTCYGAGGAAGTTCAAGATCTACTGTTGTTGGATGTCACACCRCTATCTCTTGGT 173493
Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167
|||| || ||||| || | |||||| | || || || || |||| |||
Sbjct 173494 ATTGAGACCGCTGGAGGGGTYATGACTGTCCTCATCAAGCGTAACACAACTATACCTACC 173553
Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227
|| ||| ||| || || | ||| || ||||| || ||||| || || ||
Sbjct 173554 AAGCAGACTCAGACCTTCACGACATACTCKGACAACCAGCCGGGTGTGCTGATCCAGGTT 173613
Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287
| ||| ||||| || || ||||| ||| || || || || | ||| || |
Sbjct 173614 TATGAGGGAGAGCGAGCCATGACTAAAGACAACAACCTTCTGGGCAAGTTTGAACTGACT 173673
Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347
|||||||||| ||||| || || ||||| || | || | ||| |||||||
Sbjct 173674 GGCATTCCTCCTGCACCAAGAGGTGTACCACAAATCGAGGTAACTTTCGATATTGATGCC 173733
Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTAC 452406
|| ||||| | || |||| || | || || || | || ||| |||| || || ||
Sbjct 173734 AACGGTATCTTGAACGTGACCGCCATAGAGAAGTCCACAGG-AAAGGAGAACAAGATCAC 173792
Query 452407 AATTACTAATGATAAAAACCGT-TTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465
||||| || || || |||| ||| | || || ||||||||| ||||| | || |
Sbjct 173793 CATTACAAACGACAAGGGCCGTCTTAGC-AAGGAGGATATTGAACGCATGGTCAACGATG 173851
Query 452466 CAGA 452469
||||
Sbjct 173852 CAGA 173855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975396002271488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |