Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6775 105 8e-18 seq7 87.8 2e-12 >seq6775 Length=4736 Score = 105 bits (116), Expect = 8e-18 Identities = 331/505 (66%), Gaps = 22/505 (4%) Strand=Plus/Plus Query 15879 ATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTC 15938 |||| || ||||| ||||| || | ||| || || ||| |||| || || || Sbjct 1251 ATCTGTCGGTCAAAACGACCAGGTCTAAGTAGTGCTGGATCTAGGACGTCTGGACGGTTA 1310 Query 15939 GTTGCGGCGATGACAACAATACCTGTTTCGTTA---TCAAAACCATCCATCTCTGTCAAA 15995 ||||| || | | | | |||| || ||| || |||||||||||||| || Sbjct 1311 GTTGCAGCAACTATTATCACACCT---TCATTAGACTCGAAACCATCCATCTCAACCAGT 1367 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA-TACCACCAGCACTGCGTTG 16054 | |||||| | |||||||||| ||| || || | | || | |||| | ||| || Sbjct 1368 AACTGGTTTAATGTTTGTTCCCTTTCGTCGTT-ACCGCCACCAAGACCAATGCCGCGATG 1426 Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC--- 16111 | | ||||| ||||| || || || ||||| | || || || ||||| | || Sbjct 1427 CCTACCCACTGCATCTATTTCGTCTATGAAAATTATACAAGGAGCATTTT-TCTTGCCTT 1485 Query 16112 GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 16171 || ||||| | |||||| ||||| | || || ||||| |||||||| || || || | Sbjct 1486 GA--TCAAACATATCCCGGACACGGCTTGCACCAACACCGACAAACATTTCAACGAAATC 1543 Query 16172 TGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | | ||| | || || ||||||| |||||| ||||| || || || || || Sbjct 1544 AGATCCAGAAATACTAAAAAACGGTACATTAGCTTCACCTGCAATTGCACGAGCAAGTAG 1603 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGC---- 16287 ||| ||||| || || || ||| | || ||| ||| ||||| | | Sbjct 1604 AGTTTTACCAGTTCCAGGGGAACCAATTAAAAGACATCCTTTTGGTATCTTTCCACCTAA 1663 Query 16288 CACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTT 16347 ||||| || | | || ||| ||||||||||| ||||| || |||| || |||| Sbjct 1664 CACTTGAAATTTTTGCCT----TTGTTTAAGAAAATCAACAATTTCAACCAACTCTTCTT 1719 Query 16348 TGGCGGCGTCAATCCCCTCAACATC 16372 | || | |||||||| ||||||| Sbjct 1720 TTGCTTCATCAATCCCAGCAACATC 1744 >seq7 Length=109384913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCT 102250 |||||||| ||||||||| ||||| || |||||| ||| ||| || |||| |||| | Sbjct 105115125 GCATTTGCAGCTGTTGAGGGCATCTTTTTTTCTGGTAGCTT-TGCTGCAATTTTTTGGTT 105115067 Query 102251 CAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGA 102310 || ||||||||||| |||||||| ||| ||| ||| || || ||||| || || || Sbjct 105115066 GAAAAAGCGAGGTCTTATGCCAGGCCTCACATTCAGCAATGAACTCATCTCCCGAGATGA 105115007 Query 102311 GG 102312 || Sbjct 105115006 GG 105115005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620643577809920