Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 5e-14 >seq7 Length=109384913 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||||||| || |||||||| ||| ||||||||||| ||||| ||||| | Sbjct 105115005 CCTCATCTCGGGAGATGAGTTCATTGCTGAATGTGAGGCCTGGCATAAGACCTCGCTTTT 105115064 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||||||| |||| || ||| || || || || ||||| ||||| ||| ||||| Sbjct 105115065 TCAACCAAAAAATTGCAGCA-AAGCTACCAGAAAAAAAGATGCCCTCAACAGCTGCAAAT 105115123 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCCCATTTC 117471 |||| | || || |||| | | || || | | | ||||| | ||||| | Sbjct 105115124 GCAATTATCCGTTCTCCGAATGTGGCAGTCTCGGAGCTGATCCATTCTAAGGCCCAATCT 105115183 Query 117472 GCCTTCTTCTCAATACATGGTACAGTTT 117499 |||||||||| | |||||| | |||| Sbjct 105115184 GCCTTCTTCTTCACACATGGCATGGTTT 105115211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589886875056640