Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq7 140 4e-28 >seq7 Length=109384913 Score = 140 bits (154), Expect = 4e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 37429 TTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATAT 37488 ||||| |||| || | | ||| |||||||| || | |||||||||||| || ||||| | Sbjct 105116682 TTTCTGCACTGTCATTCACATATGTATCAATGAGGAGACTATACATTTCTGAATGAATGT 105116741 Query 37489 TTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAA 37548 | || || ||||| |||||||||||||| ||||| ||||| | | ||| || || | | Sbjct 105116742 TCTCGATGGCTATTTGAAAACCATAAAAGCACCTCGCTTCGGTCACTTGCACTTCTTGAC 105116801 Query 37549 AAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAA 37608 || || | | | |||||||||||| || |||||| || |||||||| || || | Sbjct 105116802 TGAATCTTTCCACAAGGTTTTCATTAACAATGCCATCAGATGCRGCAAAGAATGCTAGGA 105116861 Query 37609 CATATTTTATAAAATGTCTTTCATC 37633 ||| ||| || |||| ||| ||||| Sbjct 105116862 CATGTTTGATGAAATATCTCTCATC 105116886 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 |||||||| | ||||| ||||| | |||||| ||||| ||||| |||||||| || Sbjct 105115043 CCTGGCATAAGACCTCGCTTTTTCAACCAAAAAATTGCAGCAAAGCTACCAGAAAAAAAG 105115102 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATAATCAG 37353 || || ||||| ||||||||||| | | ||| ||||| || | | || | | | Sbjct 105115103 ATGCCCTCAACAGCTGCAAATGCAATTATCCGTTCTCCGAATGTGGCAGTCTCGGAGCTG 105115162 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 ||||||| | | |||||||||||| || |||||| || ||||||||||| | Sbjct 105115163 --ATCCATTCTAAGGCCCAATCTGCCTTCTTCTTCACACATGGCATGGTTTCAATTGCAT 105115220 Query 37414 TTAAGAG 37420 | || || Sbjct 105115221 TGAAAAG 105115227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592222503165440