Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 3e-13 >seq7 Length=109384913 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||| || || || | ||||| || || || || || || || ||| ||| || || Sbjct 105116723 TACATTTCTGAATGAATGTTCTCGATGGCTATTTGAAAACCATAAAAGCACCTCGCTTCG 105116782 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 ||| ||||||||| |||||| |||| || || ||||| || || ||||| || Sbjct 105116783 GTCACTTGCACTTCTTGACTGAATCTTTCCACAAGGTTTTCATTAACAATGCCATCAGAT 105116842 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAAT 48578 || |||||||| || ||||||||||| | ||||| Sbjct 105116843 GCRGCAAAGAATGCTAGGACATGTTTGATGAAAT 105116876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931384499978240