Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=39772498 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || ||||| |||||||| ||| ||| | || Sbjct 4313070 AATGCAAATCTTCGTCAAGACTCTCACCGGTAAGACCATTACACTGGAAGTAGAAGCGTC 4313129 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || |||||| ||||| || ||| | || |||||| Sbjct 4313130 TGATACAATCGAGAATGTAAAAGCTAAAATCCAGGACAAGGAAGGAATACCTCCAGATCA 4313189 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||||||| || ||||| ||||||||| | || ||| | ||| | | || || || Sbjct 4313190 ACAGAGACTAATYTTTGCCGGCAAACAACTTGAGGATGGAAGAACACTTTCAGACTACAA 4313249 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| || |||||||| ||||| || |||| Sbjct 4313250 CATCCAGAAAGAATCAACTCTTCATCTGGT 4313279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425338768666944