Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_020483.1 Length=42084 Score E Sequences producing significant alignments: (Bits) Value seq4487 136 1e-27 >seq4487 Length=19373 Score = 136 bits (150), Expect = 1e-27 Identities = 263/378 (70%), Gaps = 10/378 (3%) Strand=Plus/Plus Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560 |||||| || || ||| |||| | | |||| || ||| || ||||||| ||| |||| Sbjct 17864 AATAGAGCCGTATGCAGCAAACGTATTTATACAGAAGACATTGACAGGTTCATTTGTAGT 17923 Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619 ||||||| || |||| |||||| |||||||| || || || ||| | | | Sbjct 17924 ACGAAATAAATTCTTGCAAAAACTACTAGCAGAAAAAAATCAAGA-CAATGATGAAACAT 17982 Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678 || || ||| | || | ||| |||||||| ||||||||| || | || Sbjct 17983 GGTCCTCAATTTCAACAAATGAG-GGTTCTGTTCAGCATTTAGATTTTCTTAGCAAGCAT 18041 Query 15679 GAAAAAGATACATTTAAAACATCTATA-GAAATTAATCAGCAATGGATAATAGAACATGC 15737 |||||| |||||||||||| | ||| ||| || |||| |||||||| ||||||||||| Sbjct 18042 GAAAAACTGACATTTAAAACAGC-ATACGAACTTGATCAACAATGGATCATAGAACATGC 18100 Query 15738 GGCAGACAGACAACAATTTATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGCTGA 15797 || ||| | | ||| |||||| ||| ||||||||| | || ||||||| | Sbjct 18101 AAGTGATAGAACTCCTTATATTTGTCAATCTCAATCAGTAAATCTGTTCTTACCTGCCAA 18160 Query 15798 TGTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATTAAA 15855 ||| ||| || | | ||||| | ||||| ||| | |||||||||| | | | ||| Sbjct 18161 TGT--GCATAAACGTTACTTACACAAAATACATATGCTTGCTTGGAAAAAAGGATTAAAA 18218 Query 15856 ACTTTGTATTATTGTAGA 15873 | |||||||| || ||| Sbjct 18219 AGCTTGTATTACTGCAGA 18236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134526851081472