Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 9e-13 >seq4 Length=10813142 Score = 87.8 bits (96), Expect = 9e-13 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| |||||||||||| || |||||||||| |||||||| | |||||| || | Sbjct 9986456 CTCTACTCTCTCCATAAATAGGTCAGGAATCCACAGGGCATAAAACAGATCTCTGGCGCG 9986397 Query 25981 CATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCC 26039 | ||| || || || ||| || ||||| || || | ||| ||||| | ||| | |||| Sbjct 9986396 GACTTCCTCCTTGCCTGTG-TTTTTTTTCAGGTCCAGGAACTCAAACACATCAGCATGCC 9986338 Query 26040 ATGGTTCTAAATAGATAGCAAA 26061 |||| || | || || ||||| Sbjct 9986337 ATGGCTCCAGGTAAATTGCAAA 9986316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253000723131200