Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 seq7 93.3 5e-14 >seq4 Length=10813142 Score = 158 bits (174), Expect = 1e-33 Identities = 697/1079 (65%), Gaps = 33/1079 (3%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | ||||| | | || ||| || || || ||||| || |||||||| |||| Sbjct 9995567 TTTGGCACGCTATCATYGAGTCCCAGGTAGAAACAGGGACACCCTACATGCTTTATAAGG 9995626 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 |||| ||||||| |||| ||||| ||||| | ||||| |||||| | ||||| | Sbjct 9995627 ATGCATGTAACAGGAAGTCCAACCAGCAGAATCTTGGAACGATCAAGTGTAGCAATCTAT 9995686 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAG--GATGAGACGGCTGTTTGCAATTTGGCATC 76053 |||| || ||| | || || | | | | ||||||| ||||| || || ||||| || Sbjct 9995687 GCACAGAGATTGTGGAATATA--GCTCACCTGATGAGATTGCTGTGTGTAACTTGGCCTC 9995744 Query 76054 AATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCA 76113 || ||| | | || ||| ||| || | | ||| |||| || || || | Sbjct 9995745 GATTGCCGTCAACATGTTTGTTAATTTGGACAA---CTCTTACGATTTTGTCAAGCTAAA 9995801 Query 76114 TGAA---ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170 ||| ||| |||| | || || | ||||| ||| |||| || |||| || Sbjct 9995802 -GAACGTATC-CAAAC-TAGTGACGAGGAATCTGAACAAGATCATAGATGCCAATTACTA 9995858 Query 76171 TCCCGTTGAGACTGC-GCGAAAGTCT--AATATGCGACACAGACCTATTGGTTTGGGTGT 76227 ||| |||| ||| || ||| ||| || ||| | ||| |||| ||||| | || | Sbjct 9995859 TCCAGTTG---CTGAAGCCAAACTCTCCAACATGAGGCACCGACCCATTGGCATCGGAAT 9995915 Query 76228 TCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGC-- 76284 |||||||| || |||| || || | ||| ||| | | || || ||| ||| | Sbjct 9995916 CCAAGGTCTGGCCGATGCCTTCATCCTAATGCGGCTTC-CTTTCGA--CAG-TGAGGGTT 9995971 Query 76285 CAAGGAGAT-GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343 || | | || |||||||| || ||||||||||| || ||| | ||||||| |||| Sbjct 9995972 CACGCAAATTGAATGCTCAAATTTTTGAAACCATTTACTACGGGGCATTGGAGGCTAGTT 9996031 Query 76344 GTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAG 76403 |||| | || || | || | || ||||| | ||| || | ||| | | ||| Sbjct 9996032 GTGAGCTTGCAGAGAAACTGGGGCCATACGAGACGTATGAAGGATGTCCAGT-TAGTAAG 9996090 Query 76404 GGG-TGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC-TACGACTGGGATGT 76461 || | ||||||| || ||||||| | ||| || | | | || |||| | Sbjct 9996091 GGTATTCTTCAGTACGACATGTGGGGTG-TGACTCCTACTKCTTTGTGGGATTGGGCGGC 9996149 Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521 ||| || || || | | ||| | | ||| |||| | | ||||| ||||| Sbjct 9996150 TCTAAAACAAAAAATTGCTGCACATGGTGTGAGAAACTCTCTTCTTCTTGCACCTATGCC 9996209 Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581 ||||| || || ||||| || | || || ||||||| |||||| |||||||| || || Sbjct 9996210 TACAGCTTCTACTGCACAGATACTCGGAAACAATGAATCCTTTGAGCCATACACCACGAA 9996269 Query 76582 CATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAA 76641 |||||| |||| || |||| ||||| | || ||| | ||||| | | Sbjct 9996270 TATCTACACTCGAAGGGTACTATCAGGAGAGTTCCAAGTCGTGAACCATCACCTGCTAAG 9996329 Query 76642 TGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGG 76701 || |||| || ||||| | ||| || || ||||| | || ||||| Sbjct 9996330 GGATCTCACCGAGCTTGGTTTGTGGGACAGTGAAATGAAAAACACAATACTGAAAAACAA 9996389 Query 76702 TGGTTCCATTCAAAATATCT-CAGATATCCCAGATGATATCAAGAATCTCTACCGCACAG 76760 || ||||| ||||| || |||| ||||| || || || ||| ||| || || | Sbjct 9996390 AGGGTCCATCCAAAACATAGACAGA-ATCCCGGAGGACATAAAGGCTCTGTATAAGACCG 9996448 Query 76761 TGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTG 76820 | ||||| || ||| | | | | |||||||||||||||||| ||||||| Sbjct 9996449 TTTGGGAGATTTCTCAGAAGGCGATACTCCAGATGGCCGCAGATCGTGGTGCATTCATTG 9996508 Query 76821 ATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTA 76880 ||||||| || | || | ||| | |||| | |||||| | |||| Sbjct 9996509 ATCAAAGCCAGTCACTCAACATCCACATTGCTGAGCCAAATTTTGGTAAGCTCACATCTA 9996568 Query 76881 TGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAG 76939 ||||| | |||| |||||| ||| || ||||| || ||||| ||||| || ||||| Sbjct 9996569 TGCATTTCTACGGTTGGAAATTGGGCCTAAAAACGGGGATGTATTATCTGCGGACAAAG 9996627 >seq7 Length=109384913 Score = 93.3 bits (102), Expect = 5e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 65003 AAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT 65062 |||| | |||||| | |||||||||| | ||||| | ||||| | | | || Sbjct 105115211 AAACCATGCCATGTGTGAAGAAGAAGGCAGATTGGGCCTTAGAATGGATCAGCTCCGAGA 105115152 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 || | | |||| || || | |||| ||||| ||| ||||| ||||| || || | Sbjct 105115151 CTGCCACATTCGGAGAACGGATAATTGCATTTGCAGCTGTTGAGGGCATCTTTTTTTCTG 105115092 Query 65123 GGTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 | || ||| || |||| ||||||||| ||||| ||||| ||||||||||| ||| Sbjct 105115091 GTAGCTT-TGCTGCAATTTTTTGGTTGAAAAAGCGAGGTCTTATGCCAGGCCTCACATTC 105115033 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGG 65209 |||||||| || ||||||||||||| Sbjct 105115032 AGCAATGAACTCATCTCCCGAGATGAGG 105115005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596474626119680