Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2 141 2e-28 >seq2 Length=39772498 Score = 141 bits (156), Expect = 2e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||| | | ||||| |||||||| | || | ||||| || || ||||| | Sbjct 4313299 TACCACCACGAAGGCGAAGAACCAGATGAAGAGTTGATTCTTTCTGGATGTTGTAGTCTG 4313240 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | | ||||| ||| || | |||||| |||||||| |||| |||||||||||| |||| Sbjct 4313239 AAAGTGTTCTTCCATCCTCAAGTTGTTTGCCGGCAAARATTAGTCTCTGTTGATCTGGAG 4313180 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 |||||||||| || || || ||||| | ||||| ||| || ||||| || | || | Sbjct 4313179 GTATTCCTTCCTTGTCCTGGATTTTAGCTTTTACATTCTCGATTGTATCAGACGCTTCTA 4313120 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||| || || || || ||||| || || || || || || ||||||||| Sbjct 4313119 CTTCCAGTGTAATGGTCTTACCGGTGAGAGTCTTGACGAAGATTTGCATT 4313070 Score = 98.7 bits (108), Expect = 2e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 193230 ATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTT 193289 |||| |||||||||||| |||||||||||||| || || || ||||| | ||||| ||| Sbjct 4312254 ATTAGTCTCTGTTGATCTGGAGGTATTCCTTCCTTGTCCTGGATTTTAGCTTTTACATTC 4312195 Query 193290 AAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACA 193349 || ||||| || | || || || || || || || ||||| || || || || || Sbjct 4312194 TCGATTGTATCAGACGCTTCTACCTCCAGTGTAATGGTCTTACCAGTGAGAGTYTTGACR 4312135 Query 193350 AATATTTGCATT 193361 || ||||||||| Sbjct 4312134 AAGATTTGCATT 4312123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899511175019520