Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2 147 4e-30 >seq2 Length=39772498 Score = 147 bits (162), Expect = 4e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 ||||||| | ||| || | || | ||| | ||| | ||||| ||| || || || | Sbjct 4313299 TACCACCACGAAGGCGAAGAACCAGATGAAGAGTTGATTCTTTCTGGATGTTGTAGTCTG 4313240 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | | ||||| | |||| || | |||||| || ||||| |||| |||||||||||| || | Sbjct 4313239 AAAGTGTTCTTCCATCCTCAAGTTGTTTGCCGGCAAARATTAGTCTCTGTTGATCTGGAG 4313180 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 |||||||||| || || || |||||| ||||||||| || | ||| |||| ||||| Sbjct 4313179 GTATTCCTTCCTTGTCCTGGATTTTAGCTTTTACATTCTCGATTGTATCAGACGCTTCTA 4313120 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 |||| || |||||||| ||||| || | || || | || || |||||| Sbjct 4313119 CTTCCAGTGTAATGGTCTTACCGGTGAGAGTCTTGACGAAGATTTGCATT 4313070 Score = 107 bits (118), Expect = 4e-18 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 |||| |||||||||||| || ||||||||||| || || || |||||| ||||||||| Sbjct 4312254 ATTAGTCTCTGTTGATCTGGAGGTATTCCTTCCTTGTCCTGGATTTTAGCTTTTACATTC 4312195 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | ||| |||| |||||| || || |||||||| |||||||| | || || | Sbjct 4312194 TCGATTGTATCAGACGCTTCTACCTCCAGTGTAATGGTCTTACCAGTGAGAGTYTTGACR 4312135 Query 192526 AATATCTGCATT 192537 || || |||||| Sbjct 4312134 AAGATTTGCATT 4312123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984319352553600