Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 8e-11 >seq7 Length=109384913 Score = 86.0 bits (94), Expect = 8e-11 Identities = 145/205 (71%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 869194 GATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT 869253 ||| | ||| ||||| || | |||||| ||||| || || ||||| || | |||||| || Sbjct 105115018 GATGAGTTCATTGCTGAATGTGAGGCCTGGCATAAGACCTCGCTTTTTCAACCAAAAAAT 105115077 Query 869254 GGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCT 869312 || ||| || || || || |||||||||||||| || || ||||| | || | ||| | Sbjct 105115078 TGCAGCA-AAGCTACCAGAAAAAAAGATGCCCTCAACAGCTGCAAATGCAATTATCCGTT 105115136 Query 869313 CGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCC 869372 | | || ||| | || ||| | ||||||| | | ||||| || ||||| ||| Sbjct 105115137 CTCCGAATGTGGC-AG--TCTCGGAGCTGATCCATTCTAAGGCCCAATCTGCCTTCTTCT 105115193 Query 869373 TCACCGACGGCACCGTGTCGATGGC 869397 |||| | |||| || || || || Sbjct 105115194 TCACACATGGCATGGTTTCAATTGC 105115218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106094024197312