Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq10 149 5e-31 >seq10 Length=51758932 Score = 149 bits (164), Expect = 5e-31 Identities = 206/286 (72%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 ||||||||||| || || | ||||||||||| || ||| | || | ||| || || Sbjct 5487630 GGCGGGTTTTTAAGAATATATGTGTTGAGCTTGTGGTTGAATTCAAGTGGGCCATGGAAA 5487571 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGC---TCA 34320 || ||||| |||| || |||| ||| | ||| || | | | ||| ||| | Sbjct 5487570 CCACATGCCATGCATCCTTGACTGATGGTTCCCTTCTT--CTGGCT-GATTAGCAGGTTG 5487514 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| ||||||||||| || ||||| | |||||| ||||| ||||| ||||| || ||| Sbjct 5487513 GTCTCTGGGTTGTCACACTCGGGACAAAGCACAAATTTGCGAATGAARCCATCCAGTAGG 5487454 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | | || ||||| || ||||| || ||||| || || ||||| |||| Sbjct 5487453 TCCTGGAGTCTGCTGGCATCGTGTGATCCGTTCACAATGAACCGGTCATTTTTAAAATCA 5487394 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 | ||| || ||||| |||||||| || || || ||||| || |||| Sbjct 5487393 AACTGGGTCTGCGCACCCAGCTCACAGCCAAAATACTTGGTGGGGT 5487348 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 ||||| | |||| |||||||| | || | ||||||||| ||||||||||||||||| Sbjct 5483442 GCCGGTCTGCCAATAGCCTTGGCTACGTCCGCCATGTTGACAATGACAGTCTTGATGCCA 5483383 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 ||||| ||||| || |||||||| || || ||||| ||||| |||||||| || || Sbjct 5483382 TTGCCTTTTCCCTCCACCTTGGCAATGAGCCGGGGCATCTTGTATCGGTAGAAAGCATCG 5483323 Query 34612 GCCACATTGCGGTTAACGTT 34631 || | ||||| ||||| Sbjct 5483322 CTGACGCTTCGGTTTACGTT 5483303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412777518726848