Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq4487 80.6 7e-11 >seq4487 Length=19373 Score = 80.6 bits (88), Expect = 7e-11 Identities = 143/207 (69%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 14746 CAACTGGTGGTGATGCTAATAGAAAAGCATTAAATATTCATAATGCTGT--TGTTATTAA 14803 ||||||||||||| | ||| | |||||||||||||| ||| ||||||| | || | Sbjct 17098 CAACTGGTGGTGACCCAAATCGCAAAGCATTAAATATACATCATGCTGTAATAGTAACAG 17157 Query 14804 TCAAGCCTTTTTAAATGCAGTTAGATATGATGAAAGCTGGTATTTAATTAACCCAGATAG 14863 ||| ||| | | || ||| | ||||| || ||| ||||||| | ||| ||| Sbjct 17158 ATAAG--TTTATGCAAGCTGTTGAAGATGATCAAGAATGGGATTTAATAAGCCCTCATAA 17215 Query 14864 TAATGATGTGGTAGATAAAGTAATTGCTCGTGATTTATATAAACAAATCTTAACAACAAG 14923 ||| | || | | ||||| || || ||| ||| | |||| |||||| |||| Sbjct 17216 CAATAAAGTTATTTCAACAGTAAAAGCACGGGATATATGGATTAAAATATTAACAGCAAG 17275 Query 14924 ACACCAAACTGGTGAGCCTTATATTAT 14950 | ||||||| || ||||||||||| Sbjct 17276 AATTGAAACTGGAGAACCTTATATTAT 17302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126019337952384