Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1457 87.8 3e-11 >seq1457 Length=82505 Score = 87.8 bits (96), Expect = 3e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 2133541 TCTTTGACGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGT 2133600 |||| ||||||| || ||||||||| |||| || || || | |||||||||| Sbjct 65309 TCTTCGACGAGGACCACGATGAGATGGTGGTGGTGAAAGACATCGAGATGTTCTCCATGT 65368 Query 2133601 GCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCA 2133660 ||||||||||||| ||||||| |||||||| | | |||||| ||||| | | Sbjct 65369 GCGAGCACCACCTRGTGCCCTTCTACGGCAAGGTTTCCATCGGCTACTTGCCCACCAAGA 65428 Query 2133661 AGATCATCGGTCTGAGCAAG 2133680 ||||| | ||||| |||||| Sbjct 65429 AGATCCTGGGTCTCAGCAAG 65448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176582789391232