Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq129 87.8 2e-12 >seq2 Length=39772498 Score = 113 bits (124), Expect = 4e-20 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 35543 CTCTCCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGC 35601 ||| ||||| ||||||||||| |||| | ||| ||| |||| ||||||||||| || || Sbjct 4310972 CTCACCTTTCTGAATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGC 4310913 Query 35602 AAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAG 35661 || || | ||||||||||| | || | | ||||||||| ||||| ||||| Sbjct 4310912 GAAGATGAGTCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCYTGAATCTTGGCCTTCAC 4310853 Query 35662 AGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | | | |||||| || |||||||| | ||||| || || || |||| || || Sbjct 4310852 ATTCTCGATAGTGTCGGCCGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTT 4310793 Query 35722 CACAAATATCTGCATTCT 35739 ||| || |||||||| || Sbjct 4310792 CACGAAGATCTGCATCCT 4310775 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| ||||||||||| |||| | ||| ||| |||| ||||||||||| || || || | Sbjct 2636743 CCTTCTGAATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCGAAGA 2636802 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | | ||||||||||| | || | | |||||||||| ||||| ||||| | | Sbjct 2636803 TGAGTCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCT 2636862 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| || |||||||| | ||||| || || || |||| || ||||| | Sbjct 2636863 CGATAGTGTCTGACGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGA 2636922 Query 35727 ATATCTGCATTCT 35739 | |||||||| || Sbjct 2636923 AGATCTGCATCCT 2636935 >seq129 Length=450478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||||| ||||| |||||||| || || ||||||||||| | | Sbjct 101386 CCACCGCGCAGGCGCAGTACCAAGTGTAAGGTACTCTCTTTCTGTATGTTGTAATCAGAC 101445 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || |||||||| || |||||||| | ||| || ||||| | ||| Sbjct 101446 AAGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAATATTAGCCGTTGTTGGTCAGGGGGA 101505 Query 35630 A 35630 | Sbjct 101506 A 101506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450721833658880