Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq363 105 5e-18 seq7 98.7 8e-16 >seq363 Length=233870 Score = 105 bits (116), Expect = 5e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 41003 CCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACC 41062 ||| || || ||||| ||| | |||||||| |||| | | |||||| |||| || Sbjct 170458 CCGGCGGATCATATTATGCTCTTGGAACCCCGGGGACTTGAACCAGATGGCTCTGCCCCC 170517 Query 41063 TTGTCATTTGTTATGT-CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATC 41121 ||||| | || || ||||| || ||| | | | |||||| || ||||||||||||| Sbjct 170518 MTGTCACT-GTCTGGTGCAGTTCTATGTTGCCGAGGATGAACTTTCGTGTCAATTGTATC 170576 Query 41122 AAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCA 41181 | | || | |||||||||||| || || || || ||||| || || || ||| |||| | Sbjct 170577 AGCGTTCTGCTGACATGGGACTCGGTGTACCCTTCAACATTGCCAGCTACGCTTTGCTGA 170636 Query 41182 CGTATATGATTGCACACGTTAC 41203 | |||||| | || || || || Sbjct 170637 CCTATATGGTGGCCCATGTCAC 170658 >seq7 Length=109384913 Score = 98.7 bits (108), Expect = 8e-16 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 ||||||||| | ||||| || || || ||| |||| |||||||| ||||||||||| Sbjct 105117263 AGAAAATCCAAAGCGTTTTGTTGTCTTCCCGATTGAATACCATGACATTTGGCAAATGTA 105117204 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGA 43785 ||||| || |||| ||||||||||| |||||||||||||| Sbjct 105117203 TAAAAAGGCTGAGGCTTCATTTTGGACTGCAGAAGAAGTTGA 105117162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397394306879680