Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=39772498 Score = 100 bits (110), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || || ||||| || || || || || || ||||| || | | Sbjct 4313070 AATGCAAATCTTCGTCAAGACTCTCACCGGTAAGACCATTACACTGGAAGTAGAAGCGTC 4313129 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || | ||||| ||||| ||||| ||||| |||| |||||||| Sbjct 4313130 TGATACAATCGAGAATGTAAAAGCTAAAATCCAGGACAAGGAAGGAATACCTCCAGATCA 4313189 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787 |||| | |||| ||||||||||||||||| || || | | | |||||| || ||| Sbjct 4313190 ACAGAGACTAATYTTTGCCGGCAAACAACTTGAGGATGGAAGAACACTTT--CAGACTAC 4313247 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||||| || ||||| || || | ||| | ||| Sbjct 4313248 AACATCCAGAAAGAATCAACTCTTCATCTGGTT 4313280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337957134149888