Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7 129 5e-25 >seq7 Length=109384913 Score = 129 bits (142), Expect = 5e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 4820 ATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAA 4879 ||| || || || || || ||||||||||| ||||| || || || || || || ||||| Sbjct 105116701 ATATGTATCAATGAGGAGACTATACATTTCTGAATGAATGTTCTCGATGGCTATTTGAAA 105116760 Query 4880 TCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTT 4939 || |||||||| || ||||| || ||||| ||||| | || |||||||| || | ||| Sbjct 105116761 ACCATAAAAGCACCTCGCTTCGGTCACTTGCACTTCTTGACTGAATCTTTCCACAAGGTT 105116820 Query 4940 TTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTG 4999 ||| || || || || ||| || ||||| || || | ||||| || || || Sbjct 105116821 TTCATTAACAATGCCATCAGATGCRGCAAAGAATGCTAGGACATGTTTGATGAAATATCT 105116880 Query 5000 TTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTT 5038 || || ||||| |||| |||||| |||| |||||| || Sbjct 105116881 CTCATCTGGCTTCAGTTGTTTCCAATGGGACAAATCCTT 105116919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426983313361088