Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 125 5e-24 >seq2 Length=39772498 Score = 125 bits (138), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 44144 CTCTCCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGC 44202 ||| ||||| || |||||||| |||| ||| |||| |||| ||||||||||| || || Sbjct 4310972 CTCACCTTTCTGAATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGC 4310913 Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA 44262 ||||| | |||||||| |||| || | || ||||| || ||||| ||||| Sbjct 4310912 GAAGATGAGTCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCYTGAATCTTGGCCTTCAC 4310853 Query 44263 TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 | | || |||||||| | |||||||| | || || ||||| || || |||||||| Sbjct 4310852 ATTCTCGATAGTGTCGGCCGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTT 4310793 Query 44323 CACGAAGATTTGCAT 44337 ||||||||| ||||| Sbjct 4310792 CACGAAGATCTGCAT 4310778 Score = 118 bits (130), Expect = 8e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || |||||||| |||| ||| |||| |||| ||||||||||| || || |||| Sbjct 2636743 CCTTCTGAATGTTGTAGTCGGAGAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCGAAGA 2636802 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||||| |||| || | || ||||| ||| ||||| ||||| | Sbjct 2636803 TGAGTCGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCT 2636862 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | | |||||||| | || || ||||| || || ||||||||||||| Sbjct 2636863 CGATAGTGTCTGACGCCTCCACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGA 2636922 Query 44328 AGATTTGCAT 44337 |||| ||||| Sbjct 2636923 AGATCTGCAT 2636932 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| ||||| || || || ||||||||||| || | ||| | | || || Sbjct 4313279 ACCAGATGAAGAGTTGATTCTTTCTGGATGTTGTAGTCTGAAAGTGTTCTTCCATCCTCA 4313220 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || |||||||| || | | ||| ||||||| ||| | |||||||| ||| Sbjct 4313219 AGTTGTTTGCCGGCAAARATTAGTCTCTGTTGATCTGGAGGTATTCCTTCCTTGTCCTGG 4313160 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || |||| | ||| | || || || | | ||| || |||| ||||| ||||| Sbjct 4313159 ATTTTA-GCTTTTACATTCTCGATTGTATCAGACGCTTCTACTTCCAGTGTAATGGTCTT 4313101 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| Sbjct 4313100 ACCGGTGAGAGTCTTGACGAAGATTTGCAT 4313071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359934522290112