Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq146520 86.0 5e-12 >seq146520 Length=2054 Score = 86.0 bits (94), Expect = 5e-12 Identities = 196/295 (66%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 101690 ATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGA 101749 || |||| || ||| | || |||| || || ||||| ||||| || || | || Sbjct 695 ATATGATTTAGATAAACATGTACATCGCCCATTGTATGAATAAAATCGCCTGTTTTAAGT 636 Query 101750 TTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACT 101809 || ||||| |||||||| || | ||| |||||||||| || ||||||||||| Sbjct 635 CCCGTCACATGCGCAATCATATGCGTCAGCAGACAATAGCTAGCGATATTAAATGGCACA 576 Query 101810 CCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACA 101869 || | |||||||| || || | |||||||| ||| || || | |||| | || Sbjct 575 CCAAGGCCCATATCGGCGGAACGTTGATACAACATACACGATAGTTCACCATTTGACACG 516 Query 101870 TAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTC 101929 ||||| || || |||||||| || || | |||| || ||||| | |||| Sbjct 515 TAAAACTGTGATAGAACATGACATGGTGGTAGGGCCATAAGTGGGATGTCGGTGGGATTC 456 Query 101930 CAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCA 101984 || || |||||| || | | ||| | || || |||| || |||| |||| Sbjct 455 CATGCCGACATTATGATACGACGATCCATTGGATTATTTTTAATTTTATCGATCA 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360428484710864