Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq96081 156 2e-33 >seq96081 Length=11761 Score = 156 bits (172), Expect = 2e-33 Identities = 188/256 (73%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 |||| ||||| ||||||||||| || || || ||||||||| | | ||||||||| || | Sbjct 1835 AAGGAGTACACTTTATGATGGCCGATGGCGGATTCTCGGTTAAAGATCAAGAAAACATTC 1894 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 | ||||| || || ||| || ||||||| || ||||||||| |||| | || | Sbjct 1895 AGGAAATCTTGTCAAAACAGTTGTATTTATGCCAATGTTTAGTTGCCCTCTATATTGTTA 1954 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 ||| || |||| ||| ||||| || ||| |||||||||| ||||||| ||| | Sbjct 1955 GAAAAAAGGGCCATTTCGTTTGTAAATTATTTGATTTATTTACACCGTTTAGTGTTGGCT 2014 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGC 4112 |||| ||||| ||||||| || ||| | || |||| ||||| |||||| | | | Sbjct 2015 TAGTCTATTTAATGTATAAATGTTTCGAGCGGATTTCCATTTTTAAACCAAACACGAGTC 2074 Query 4113 GACCGGCCAATTCTGA 4128 |||| || || ||||| Sbjct 2075 GACCAGCTAACTCTGA 2090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275923775448592