Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq146520 111 1e-19 >seq146520 Length=2054 Score = 111 bits (122), Expect = 1e-19 Identities = 209/306 (68%), Gaps = 6/306 (2%) Strand=Plus/Minus Query 20202 CATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATAT 20261 |||| |||| || |||||||| || || | | |||| || || ||||| |||| ||||| Sbjct 673 CATCGCCCATTGTATGAATAAAATCGCCTGTTTTAAGTCCCGTCACATGCGCAATCATAT 614 Query 20262 AAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACC 20321 || | || ||||||| || || ||||| || || || | ||||| || | || | Sbjct 613 GCGTCAGCAGACAATAGCTAGCGATATTAAATGGCACACCAAGGCCCATATCGGCGGAAC 554 Query 20322 TCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGAC 20381 ||||||| | ||| || || ||||| | | || ||||| || ||| | |||| Sbjct 553 GTTGATACAACATACACGATAGTTCACCATTTGACACGTAAAACTGTGATAGAACATGAC 494 Query 20382 AGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTC 20441 | || || || ||||| | | | ||| | || ||||| || |||| ||||| | | Sbjct 493 ATGGTGGTAGGGCCATAAGTGGGATGTCGGTGGGATTCCATGCCGACATTATGATACGAC 434 Query 20442 TATCGTGCGGATTATTTTTTATTAAATC---CACAATGTACGACAATTGGTCAAACCCCT 20498 ||| ||||||||||| ||| ||| |||| || |||| || |||| |||| Sbjct 433 GATCCATTGGATTATTTTTAATTTTATCGATCACATCGT---ACAACTGATCAATGCCCT 377 Query 20499 GGCCTG 20504 |||||| Sbjct 376 GGCCTG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440341841413760