Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq146712 105 8e-18 >seq146712 Length=6971 Score = 105 bits (116), Expect = 8e-18 Identities = 233/347 (67%), Gaps = 18/347 (5%) Strand=Plus/Plus Query 114275 aaaaTAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334 || || ||| |||| || | |||||| ||||| | |||||||| |||||||||||||| Sbjct 3135 AATATGAATGCATCAGCCATACCTTGTACACCAATCCCAATTGGTCGATGTCTCATATTG 3194 Query 114335 GAC--TTTCGAGCGGTCTCCACGG----GATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || ||| | || || || |||| |||| ||| || | |||||| | Sbjct 3195 GAACGTTTTG------CTTCAGGGATTGGATAGTAATTAACATCAATTATTTTATTTAAA 3248 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 114448 ||||| || |||| || || | ||| | | ||| | |||| | | | || Sbjct 3249 TTTTTTGTCACAATTTTAGTAACTTCTTTCAACTTGTTAAAATCGTATTTTT---TTTCA 3305 Query 114449 T---CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 114505 | |||| ||| || || |||||||||||||| | |||||| || | ||||| Sbjct 3306 TTAACATTTACAAACATATTGAGGGCGATTGACGCTAAATTACAAACGGCTACTTCATCT 3365 Query 114506 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 114565 || | | |||| |||||| ||||||||||| |||| |||||||| || | || Sbjct 3366 TTTGACGAAAATTCTACAATTTCGGTACACAAATTGGAACATTTAATGGTACCGATATTT 3425 Query 114566 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 114612 | |||||| || ||| ||||| ||||| || || ||||| || || Sbjct 3426 TGTTGATTGGATTTTCGATTACAAGCATCTTTATACAGCATATACGG 3472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595958301461120