Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq105237 116 9e-21 >seq105237 Length=11214 Score = 116 bits (128), Expect = 9e-21 Identities = 150/204 (74%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 |||||||||||||||| ||||| |||| ||| || || |||||||| | || || || Sbjct 9079 GTCGACTCCTTTTGGATATTGTAATCAGACAATGTTCTGCCATCTTCTAATTGTTTGCCT 9020 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TT 199551 || || |||||||| || || || || ||| |||||| |||||||| ||| || || Sbjct 9019 GCAAAAATGAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGAAT-TTTAGCTTT 8961 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | || |||| || ||| || || | ||||| ||||| ||||| | || Sbjct 8960 GACATTTTCAATTGTATCTGATGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTCAATGT 8901 Query 199612 TTTCACAAAAATTTGGTACATTTT 199635 ||| ||||| ||||| |||||| Sbjct 8900 TTTTACAAAGATTTG---CATTTT 8880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176099031799888