Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq146712 123 3e-23 >seq146712 Length=6971 Score = 123 bits (136), Expect = 3e-23 Identities = 440/683 (64%), Gaps = 10/683 (1%) Strand=Plus/Minus Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || |||||||| || ||||| || ||||| | ||| |||||| | ||| | ||| Sbjct 3472 CCGTATATGCTGTATAAAGATGCTTGTAATCGAAAATCCAATCAACAAAATATCGGTACC 3413 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 || || ||||||| | ||||| ||||| | |||||| | |||||||| || Sbjct 3412 ATTAAATGTTCCAATTTGTGTACCGAAATTGTAGAATTTTCGTCAAAAGATGAAGTAGCC 3353 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || ||||| | || |||||||| ||| | || ||| || | ||| | || Sbjct 3352 GTTTGTAATTTAGCGTCAATCGCCCTCAATATGTTTGTAAATGTTAATGAAAAAAAATAC 3293 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 |||| | | || | | |||||||| |||| ||| |||||||| |||| | | | ||| Sbjct 3292 GATTTTAACAAGTTGAAAGAAGTTACTAAAATTGTGACAAAAAATTTAAATAAAATAATT 3233 Query 112557 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 ||| |||| || || | ||| | ||| || ||||||||||| || ||| Sbjct 3232 GATGTTAATTACTATCCAATCCCTGAAGCAAAACGT---TCCAATATGAGACATCGACCA 3176 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGAT 112673 ||||| | ||||| |||||| | || |||| |||||| | || | |||| ||| Sbjct 3175 ATTGGGATTGGTGTACAAGGTATGGCTGATGCATTCATATTAATGCGTTATGCATATGAA 3116 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || || || | | | || || || || |||||||| || ||| || | Sbjct 3115 AGTGAAGAGGCACAATTATTAAACCAGCAAATTTTCGAGACAATATACTACGGTGCATTA 3056 Query 112734 GAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 112793 || || |||| || | || || || | || ||||| | ||| || |||| Sbjct 3055 GAAGCTAGTTGCGAACTAGCTGAAAAATTAGGCACCTACGAAACATATGAAGGAAGTCCA 2996 Query 112794 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCACTACG 112851 | |||| | | || | |||||||| |||| | ||| || || | | | Sbjct 2995 GTAAGTAAAGGCATCTTGCAGTATGATATGT-GGAATAAAACTCCAACAGATTTA-TGGG 2938 Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 | ||| ||| | |||| | ||| | || | || || | || |||| | | | Sbjct 2937 ATTGGACCGCGTTGAAGGCAAAAATCGCGAAGCATGGAGTTAGAAATTCTCTTCTCTTAG 2878 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 | |||||||| || || || ||||||||||| ||||| |||||||||| || ||||||| Sbjct 2877 CTCCAATGCCGACTGCTTCTACCGCACAAATTTTGGGAAATAATGAATCTTTCGAACCCT 2818 Query 112972 ACACGACGAACATCTATCTGAGA 112994 | ||| | ||| | ||| |||| Sbjct 2817 ATACGTCAAACGTATATACGAGA 2795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619292469902080