Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq40814 89.7 7e-13 >seq40814 Length=11566 Score = 89.7 bits (98), Expect = 7e-13 Identities = 162/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 126906 ATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCAACATAC 126965 |||||| ||| ||||||| ||| || || | || | ||| | |||||||| || Sbjct 6778 ATGTATAACGGTCATACTGGACGAAAAATTAATGCTCAAGTATTTTTGGGTCCAACCTAT 6719 Query 126966 TATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTA 127025 ||||| ||| | ||||||||||| | |||||||| ||| || || || ||||| ||| Sbjct 6718 TATCAACGTTTAAAACATATGGTCGACGATAAAATCCATTCTCGAGCTCGTGGTCCTGTA 6659 Query 127026 ACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGA 127085 || || || ||||| | |||||| | | | ||||| || | ||||| Sbjct 6658 CAAATTTTGGTACGACAACCTATGGAAGGTCGTGCTCGTGACGGTGGTCTACGGTTTGGT 6599 Query 127086 GAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGA 127142 ||||||||| |||||| | | |||||| || |||||||| || |||||| Sbjct 6598 GAAATGGAACGGGATTGTCAGATTGCTCATGGTGCAGCACAATTTCTACGGGAAAGA 6542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656865301805440