Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq6781 82.4 5e-11 >seq6781 Length=10088 Score = 82.4 bits (90), Expect = 5e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 96135 AAAGCCTTCTTCTAGAATTTTCT-GAGCTAATACTGTAGCTGTGGTTGTTCCATCTCCTA 96193 ||||||||||| ||| | || || |||| ||||| || || || ||||||||||| || Sbjct 6967 AAAGCCTTCTT-TAGCAATTGCTCGAGCCAATACGGTTGCAGTTGTTGTTCCATCGCCAG 6909 Query 96194 CTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAATG 96253 ||||| || ||||| | ||| || | || | | || |||||| | |||| |||| Sbjct 6908 CTTCTTCGTTTGTATTATTAGCAACATCTTGCACAAGTTTAGCACCAATATTTTGAAATT 6849 Query 96254 GATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAAT 96302 ||| | ||| | ||| || | || || |||||||||| || || || Sbjct 6848 TATCCTTTAATTCAATACCTTTGGCTACTGTTACACCATCCTTTGTGAT 6800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 320481268363216