Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq47011 107 1e-18 >seq47011 Length=3271 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || || || || ||||| | | | ||| |||| |||| ||| || || ||||| Sbjct 1497 TCCTTTTGGATATTGTAATCCGACAAGGTACGCCCATCTTCCAATTGTTTACCAGCGAAA 1556 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || | ||||| || ||| | || | ||| || ||||| | ||||| ||||| | Sbjct 1557 ATTAAACGTTGTTGATCTGGTGGAATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTT 1616 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || |||| |||||||||||||||||| || || |||||| Sbjct 1617 TCGATAGTATCGGATGGCTCAACCTCAAGGGTTATGGTCTTTCCCGTAAGTGTTTTTACA 1676 Query 34967 AAGATCTGCATGAT 34980 ||||| |||||||| Sbjct 1677 AAGATTTGCATGAT 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324951065588816