Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq46618 82.4 1e-10 >seq46618 Length=8955 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 51965 AATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTT 52024 ||||||||| | ||| | |||||||||||||||||||||| ||||| |||||| | Sbjct 3668 AATGAATTTAAGTTGTACTTCACCATATAATGCTGATTTTGATGGAGATGAGATGAATCT 3727 Query 52025 ACATGTTCCTCAATCATATGGA 52046 ||||||||| |||||| ||||| Sbjct 3728 ACATGTTCCACAATCA-ATGGA 3748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633693952161920