Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq158887 86.0 2e-11 >seq158887 Length=2799 Score = 86.0 bits (94), Expect = 2e-11 Identities = 204/301 (68%), Gaps = 7/301 (2%) Strand=Plus/Plus Query 188779 GGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATG-TTACATGT 188837 ||||| || |||||||||||||| || | || |||||| | || | ||| ||| |||| Sbjct 1343 GGCCCAACCGGTTCAGGTAAAACTTTGCTCGCCCAAACAATAGC-CAAATGTTTAGATGT 1401 Query 188838 ACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGT 188897 ||| | || || | ||| ||| | | || ||||||||||||| || ||||| | Sbjct 1402 TCCTTTTGCAATTTGCGATTGTACTACACTTACCCAAGCTGGTTATGTTGGCGAAGACAT 1461 Query 188898 GGAAAACGT-ATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAAC 188956 ||| || ||||| | || | |||| ||| |||| | | ||| || | Sbjct 1462 TGAATCGGTGATTGCAAAG-CTATTACAAGACGCTAATTATAGTGTAGAAAGGGCACAGA 1520 Query 188957 GTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCA 189016 |||||| || | | | ||||| || |||||||||| | | | || | |||| | Sbjct 1521 CTGGAATCGTGTTTTTGGATGAGGTTGATAAAATTGGGGCAGTTCCCGGAATC-CATCAA 1579 Query 189017 TTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTA 189076 ||| |||||||| ||| ||||| ||||| |||| | | ||||||| | ||||||| Sbjct 1580 TTA--CGAGATGTTGGTGGTGAAGGTGTACAACAAGGTATGCTAAAAATGTTGGAAGGTA 1637 Query 189077 C 189077 | Sbjct 1638 C 1638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588099056079872