Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq146520 82.4 9e-11 >seq146520 Length=2054 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 || || || || || || | || |||| || || | ||| || || | ||||| || Sbjct 692 TGATTTAGATAAACATGTACATCGCCCATTGTATGAATAAAATCGCCTGTTTTAAGTCCC 633 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 ||||| || || | ||| | || ||||| | ||||| || || || || || || || Sbjct 632 GTCACATGCGCAATCATATGCGTCAGCAGACAATAGCTAGCGATATTAAATGGCACACCA 573 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111 |||||||| || | || | || |||| | ||||| || || || | | ||||||| Sbjct 572 AGGCCCATATCGGCGGAACGTTGATACAACATACACGATAGTTCACCATTTGACACGTAA 513 Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAG 147171 ||||| | || | || || || || || ||||| || | ||| | ||| ||||| Sbjct 512 AACTGTGATAGAACATGACATGGTGGTAGGGCCATAAGTGGGATGTCGGTGGGATTCCAT 453 Query 147172 GCCGA 147176 ||||| Sbjct 452 GCCGA 448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582125088729600