Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq30765 132 7e-26 >seq30765 Length=14077 Score = 132 bits (146), Expect = 7e-26 Identities = 202/288 (70%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 || ||| | || || | ||||||||| ||||| | ||| |||| ||| || Sbjct 10213 GCAAAAATGTACGGTTTTTGGATTGTTGTAAACTATCGCGAGGCATATGACATGTTCGTT 10272 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 ||| |||||| || ||||| |||||||| |||||||| || || | ||||||||| ||| Sbjct 10273 TGTAATGGTATACTGTTCAATCATGAGTCGCCACGACGTGGAGAAAATTTCGTAACTCGT 10332 Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGT 161587 || |||||| || || | ||| | | | ||| | | | ||||| Sbjct 10333 AAAATTACTCGGTCCGTAGCTAAAATTTTCCTAAACCAATTGGAGTACTTCGAATTAGGT 10392 Query 161588 AATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTG 161647 ||| || |||||| ||| |||||||||||||| |||| ||||| ||||| |||||| || Sbjct 10393 AATTTAGACTCAAAACGTGATTGGGGTCATGCACAAGATTATGTTGAGGCAATGTGGATG 10452 Query 161648 ATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAA 161695 |||||||| |||| || || |||| ||| || ||||| ||| || Sbjct 10453 ATGTTACAGTTAGAAAAACCAGAAGACTTTGTTATAGCCACCGGTGAA 10500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728224630440320