Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq146520 109 4e-19 >seq146520 Length=2054 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 111718 ATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAA 111777 || ||||||| ||||||||| |||| || || ||| || || || | | | | Sbjct 695 ATATGATTTAGATAAACATGTACATCGCCCATTGTATGAATAAAATCGCCTGTTTTAAGT 636 Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || || | || |||||||| | || || |||| || ||||| || |||||||||||| Sbjct 635 CCCGTCACATGCGCAATCATATGCGTCAGCAGACAATAGCTAGCGATATTAAATGGCACA 576 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || ||||||||||| | || | |||||| | | ||| ||||||| | | |||||| Sbjct 575 CCAAGGCCCATATCGGCGGAACGTTGATACAACATACACGATAGTTCACCATTTGACACG 516 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 ||||| || | || |||||||| || || | ||||| Sbjct 515 TAAAACTGTGATAGAACATGACATGGTGGTAGGGCCAT 478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391052981130832