Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq15552 132 6e-26 >seq15552 Length=8850 Score = 132 bits (146), Expect = 6e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 89199 GATCCTGTCTTGCATATAGAACTTAG-GAGGTGGGCTGATATATTTATTATCGCGCCACT 89257 |||||||| || ||||| || ||| | || ||||| || ||| || |||| || ||||| Sbjct 5885 GATCCTGTATTACATATTGA-CTTGGTGAAATGGGCGGACATAATTGTTATTGCACCACT 5827 Query 89258 AACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCTAT 89317 | || ||||| ||||| || |||||| |||||||||||| || |||| || | Sbjct 5826 AGATGCAAATACACTAGCAAAAATAGCTTGTGGTATATGCGATAATCTACTTCTTTGCAC 5767 Query 89318 AGTTAGGGCATGGGATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAAT 89377 |||| |||| |||||| || | || || | | |||||||| || ||||| || ||| Sbjct 5766 AGTTCGGGCTTGGGATGTAACCAAACCGTTACTGTTTTGTCCAGCGATGAACACAAAAAT 5707 Query 89378 GTGGGAACATCCTATTACTGAATCACAAATAGATACT 89414 |||||||||||| || || | ||||||| |||||| Sbjct 5706 GTGGGAACATCCAATCACCAAGCCACAAATTGATACT 5670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601771890287360