Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tipula_20oleracea_20[genbank_20GCA_5F001017535.1_202015-06-01] 186,864 sequences; 541,697,276 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq146520 87.8 1e-12 >seq146520 Length=2054 Score = 87.8 bits (96), Expect = 1e-12 Identities = 170/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725 || || || || |||| |||| || || | ||| || || | || || || || || Sbjct 686 AGATAAACATGTACATCGCCCATTGTATGAATAAAATCGCCTGTTTTAAGTCCCGTCACA 627 Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || ||||| | ||| || ||| | ||||| ||||| ||||| ||||| || || ||| Sbjct 626 TGCGCAATCATATGCGTCAGCAGACAATAGCTAGCGATATTAAATGGCACACCAAGGCCC 567 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 29845 || || | || | || || | | ||||| || || || | |||||||||||| Sbjct 566 ATATCGGCGGAACGTTGATACAACATACACGATAGTTCACCATTTGACACGTAAAACTGT 507 Query 29846 CACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACAC 29905 | | |||| || || || |||||||| || | ||| |||| ||||| || || Sbjct 506 GATAGAACATGACATGGTGGTAGGGCCATAAGTGGGATGTCGGTGGGATTCCATGCCGAC 447 Query 29906 ACGATGATGCG 29916 | ||||| || Sbjct 446 ATTATGATACG 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405238201897504